Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.11□□□□□ -0.79
Spg11Q3UHA3 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Gm14276-201ENSMUST00000117941 720 ntBASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Gm11929-201ENSMUST00000118175 945 ntBASIC10.11□□□□□ -0.79
Spg11Q3UHA3 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Gm39481-201ENSMUST00000210379 512 ntBASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Olfr533-201ENSMUST00000071755 1052 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Cox7a1-201ENSMUST00000098594 393 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Gm6141-201ENSMUST00000117181 695 ntBASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Gm30652-201ENSMUST00000199103 430 ntBASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Gm6439-201ENSMUST00000199849 862 ntBASIC10.11□□□□□ -0.79
Spg11Q3UHA3 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Spg11Q3UHA3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 AC125487.1-201ENSMUST00000217888 1300 ntBASIC10.1□□□□□ -0.79
Spg11Q3UHA3 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Gm25426-201ENSMUST00000157606 170 ntBASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 AC153948.2-201ENSMUST00000218112 505 ntBASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Gm45663-201ENSMUST00000210429 1632 ntBASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Spg11Q3UHA3 Gm11652-201ENSMUST00000117842 1267 ntBASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Gm11771-201ENSMUST00000118124 732 ntBASIC10.09□□□□□ -0.79
Spg11Q3UHA3 4933406K04Rik-201ENSMUST00000124068 1136 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Scgb1b21-201ENSMUST00000170232 268 ntBASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 2010009K17Rik-201ENSMUST00000186977 567 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Spg11Q3UHA3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms