Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 AC126444.1-201ENSMUST00000225938 1768 ntBASIC8.99□□□□□ -0.97
Trim63Q38HM4 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Kif28-201ENSMUST00000131716 3526 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Nfatc1-203ENSMUST00000167977 4604 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Sfmbt1-202ENSMUST00000112184 2936 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Gm1840-201ENSMUST00000051687 1432 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 AC154377.1-201ENSMUST00000226752 4979 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 Rnf121-201ENSMUST00000089052 2344 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Gm16630-201ENSMUST00000180741 3257 ntTSL 5 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Snord83b-201ENSMUST00000104546 94 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Gm4204-201ENSMUST00000110798 1231 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 Gm13492-201ENSMUST00000119772 665 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 Gm12129-201ENSMUST00000120104 1147 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Gm5896-201ENSMUST00000189662 1024 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 AC159896.2-201ENSMUST00000214753 269 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 AC113125.1-201ENSMUST00000226852 1774 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 Gm15947-201ENSMUST00000161395 2742 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 Gm43481-201ENSMUST00000201715 3672 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 AC022682.1-201ENSMUST00000224624 2023 ntBASIC8.98□□□□□ -0.97
Trim63Q38HM4 Gm43135-201ENSMUST00000196442 3462 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 4930503B20Rik-201ENSMUST00000049703 2080 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Nfatc1-201ENSMUST00000035800 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Lnpk-203ENSMUST00000111993 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 C7-201ENSMUST00000110689 2676 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Trim63Q38HM4 Inpp5k-201ENSMUST00000006286 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim63Q38HM4 C2-205ENSMUST00000148431 1946 ntTSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Tusc5-201ENSMUST00000062024 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Celf4-202ENSMUST00000115816 3995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 AC163040.1-201ENSMUST00000222979 4288 ntBASIC8.97□□□□□ -0.97
Trim63Q38HM4 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Plcd4-202ENSMUST00000067916 4552 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm44573-201ENSMUST00000191753 2370 ntBASIC8.97□□□□□ -0.97
Trim63Q38HM4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm14247-201ENSMUST00000120950 237 ntBASIC8.97□□□□□ -0.97
Trim63Q38HM4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm16199-201ENSMUST00000160032 288 ntBASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm6981-201ENSMUST00000182467 1008 ntBASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm38092-201ENSMUST00000195600 653 ntBASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm4870-201ENSMUST00000198525 1251 ntBASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm43452-201ENSMUST00000201873 991 ntBASIC8.97□□□□□ -0.97
Trim63Q38HM4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms