Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm43442-201ENSMUST00000202865 414 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 AC157570.2-201ENSMUST00000219091 700 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Rpl21-ps12-201ENSMUST00000080061 480 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm17026-201ENSMUST00000166674 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm17124-201ENSMUST00000168320 1379 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Ptprm-203ENSMUST00000224091 3773 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 AC135083.1-201ENSMUST00000227773 1331 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm45440-201ENSMUST00000209826 1655 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm14083-201ENSMUST00000117873 620 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm14663-201ENSMUST00000118474 1153 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm15586-201ENSMUST00000121218 528 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm6669-201ENSMUST00000179088 997 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Ctss-202ENSMUST00000116304 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Pax4-201ENSMUST00000031718 1370 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm44014-201ENSMUST00000205150 1509 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm42913-201ENSMUST00000197936 1853 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 AC121805.2-201ENSMUST00000218808 2538 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm12188-201ENSMUST00000117387 310 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm5550-201ENSMUST00000198658 1076 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 AC157650.1-201ENSMUST00000224582 610 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Rnase11-201ENSMUST00000076106 713 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm38111-201ENSMUST00000194817 2741 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm2214-201ENSMUST00000121333 330 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm15849-201ENSMUST00000159257 335 ntTSL 3 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Coq8a-208ENSMUST00000160879 561 ntTSL 5 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 2900076A07Rik-201ENSMUST00000180385 914 ntTSL 3 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 2900076A07Rik-207ENSMUST00000181492 720 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm37141-201ENSMUST00000191938 422 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm37804-201ENSMUST00000192206 547 ntTSL 5 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm36973-201ENSMUST00000193942 259 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm2767-201ENSMUST00000209582 473 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm18226-201ENSMUST00000215261 521 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm10260-201ENSMUST00000074072 561 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm5407-201ENSMUST00000080694 747 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm7275-201ENSMUST00000088296 744 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Hsd11b1-205ENSMUST00000161737 1355 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Kcnip4-206ENSMUST00000175660 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 1700023G09Rik-201ENSMUST00000194513 1460 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Rpl7l1-ps1-201ENSMUST00000118822 725 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm45638-201ENSMUST00000211507 2878 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms