Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC9.39□□□□□ -0.91
Smn1P97801 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.38□□□□□ -0.91
Smn1P97801 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Smn1P97801 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.38□□□□□ -0.91
Smn1P97801 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Smn1P97801 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Gm22323-201ENSMUST00000103832 109 ntBASIC9.38□□□□□ -0.91
Smn1P97801 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Gm14592-201ENSMUST00000117201 560 ntBASIC9.38□□□□□ -0.91
Smn1P97801 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC9.38□□□□□ -0.91
Smn1P97801 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC9.38□□□□□ -0.91
Smn1P97801 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Smn1P97801 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC9.38□□□□□ -0.91
Smn1P97801 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Gm7741-201ENSMUST00000181445 989 ntBASIC9.38□□□□□ -0.91
Smn1P97801 Gm27320-201ENSMUST00000184892 109 ntBASIC9.38□□□□□ -0.91
Smn1P97801 Gm37259-201ENSMUST00000193903 849 ntBASIC9.38□□□□□ -0.91
Smn1P97801 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.38□□□□□ -0.91
Smn1P97801 Gm6082-201ENSMUST00000215204 454 ntBASIC9.38□□□□□ -0.91
Smn1P97801 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.38□□□□□ -0.91
Smn1P97801 CT025602.2-201ENSMUST00000226553 772 ntBASIC9.38□□□□□ -0.91
Smn1P97801 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Smn1P97801 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.38□□□□□ -0.91
Smn1P97801 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.38□□□□□ -0.91
Smn1P97801 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 AC154849.3-201ENSMUST00000223733 1660 ntBASIC9.38□□□□□ -0.91
Smn1P97801 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Smn1P97801 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.38□□□□□ -0.91
Smn1P97801 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smn1P97801 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC9.37□□□□□ -0.91
Smn1P97801 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.37□□□□□ -0.91
Smn1P97801 Gm8731-201ENSMUST00000118088 412 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Gm14130-201ENSMUST00000118417 987 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.37□□□□□ -0.91
Smn1P97801 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC9.37□□□□□ -0.91
Smn1P97801 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.37□□□□□ -0.91
Smn1P97801 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.37□□□□□ -0.91
Smn1P97801 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Gm12407-201ENSMUST00000180219 324 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Gm29499-201ENSMUST00000189151 486 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Gm28329-201ENSMUST00000191208 689 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Gm29171-201ENSMUST00000191397 486 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.37□□□□□ -0.91
Smn1P97801 Gm42660-201ENSMUST00000197733 947 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Gm4482-201ENSMUST00000200876 742 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Gm3961-201ENSMUST00000204425 994 ntBASIC9.37□□□□□ -0.91
Smn1P97801 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.37□□□□□ -0.91
Smn1P97801 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.37□□□□□ -0.91
Smn1P97801 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.37□□□□□ -0.91
Smn1P97801 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.37□□□□□ -0.91
Smn1P97801 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smn1P97801 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms