Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-3P97334 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-3P97334 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gm5472-201ENSMUST00000178604 1678 ntBASIC13.79□□□□□ -0.2
Nkx2-3P97334 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC13.79□□□□□ -0.2
Nkx2-3P97334 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gm13171-201ENSMUST00000117233 391 ntBASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gm12028-201ENSMUST00000118065 436 ntBASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gm24140-201ENSMUST00000122773 326 ntBASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gm7255-201ENSMUST00000187371 908 ntBASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gm17796-201ENSMUST00000189015 1213 ntBASIC13.79□□□□□ -0.2
Nkx2-3P97334 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gm43037-201ENSMUST00000196808 250 ntBASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gm9644-201ENSMUST00000212828 1183 ntBASIC13.79□□□□□ -0.2
Nkx2-3P97334 AC124581.2-201ENSMUST00000225459 282 ntBASIC13.79□□□□□ -0.2
Nkx2-3P97334 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-3P97334 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gm38312-201ENSMUST00000195426 1746 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gm23439-201ENSMUST00000104292 132 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gm6630-201ENSMUST00000119199 454 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gm14148-201ENSMUST00000122433 1008 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gm15258-201ENSMUST00000153801 741 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Ap1g1-206ENSMUST00000179104 1096 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gm4960-201ENSMUST00000182928 1001 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gm29543-201ENSMUST00000188138 967 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gm42617-201ENSMUST00000197640 1229 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gm18539-201ENSMUST00000204745 1090 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 AC107752.1-201ENSMUST00000219362 469 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 AC133517.1-201ENSMUST00000225825 594 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 CT010505.2-201ENSMUST00000227918 998 ntBASIC13.78□□□□□ -0.2
Nkx2-3P97334 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-3P97334 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms