Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Gm37859-201ENSMUST00000195529 2173 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.81□□□□□ -0.84
H3f3aP84244 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
H3f3aP84244 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
H3f3aP84244 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
H3f3aP84244 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.8□□□□□ -0.84
H3f3aP84244 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
H3f3aP84244 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.8□□□□□ -0.84
H3f3aP84244 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Snord23-201ENSMUST00000116828 109 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 Gm12791-201ENSMUST00000120788 655 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 Gm12208-201ENSMUST00000122004 163 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 Gm4879-201ENSMUST00000122190 1272 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.8□□□□□ -0.84
H3f3aP84244 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC9.8□□□□□ -0.84
H3f3aP84244 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.8□□□□□ -0.84
H3f3aP84244 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC9.8□□□□□ -0.84
H3f3aP84244 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Gm9358-201ENSMUST00000183067 927 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC9.8□□□□□ -0.84
H3f3aP84244 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC9.8□□□□□ -0.84
H3f3aP84244 Gm9102-201ENSMUST00000219250 465 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
H3f3aP84244 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
H3f3aP84244 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
H3f3aP84244 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
H3f3aP84244 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.8□□□□□ -0.84
H3f3aP84244 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
H3f3aP84244 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.8□□□□□ -0.84
H3f3aP84244 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.8□□□□□ -0.84
H3f3aP84244 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3aP84244 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
H3f3aP84244 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
H3f3aP84244 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
H3f3aP84244 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.79□□□□□ -0.84
H3f3aP84244 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC9.79□□□□□ -0.84
H3f3aP84244 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
H3f3aP84244 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
H3f3aP84244 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms