Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.3□□□□□ -0.6
Ybx1P62960 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ybx1P62960 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ybx1P62960 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.3□□□□□ -0.6
Ybx1P62960 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ybx1P62960 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.29□□□□□ -0.6
Ybx1P62960 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.29□□□□□ -0.6
Ybx1P62960 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Ybx1P62960 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ybx1P62960 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ybx1P62960 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.29□□□□□ -0.6
Ybx1P62960 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.29□□□□□ -0.6
Ybx1P62960 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Gm23675-201ENSMUST00000157311 125 ntBASIC11.29□□□□□ -0.6
Ybx1P62960 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.29□□□□□ -0.6
Ybx1P62960 Gm11942-201ENSMUST00000180255 345 ntBASIC11.29□□□□□ -0.6
Ybx1P62960 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ybx1P62960 Gm21156-201ENSMUST00000189693 869 ntBASIC11.29□□□□□ -0.6
Ybx1P62960 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.29□□□□□ -0.6
Ybx1P62960 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.29□□□□□ -0.6
Ybx1P62960 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.29□□□□□ -0.6
Ybx1P62960 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Ybx1P62960 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ybx1P62960 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.29□□□□□ -0.6
Ybx1P62960 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ybx1P62960 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ybx1P62960 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.29□□□□□ -0.6
Ybx1P62960 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.29□□□□□ -0.6
Ybx1P62960 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ybx1P62960 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ybx1P62960 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ybx1P62960 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ybx1P62960 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.28□□□□□ -0.6
Ybx1P62960 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ybx1P62960 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ybx1P62960 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ybx1P62960 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.28□□□□□ -0.6
Ybx1P62960 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ybx1P62960 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.28□□□□□ -0.6
Ybx1P62960 Gm24279-201ENSMUST00000104236 131 ntBASIC11.28□□□□□ -0.6
Ybx1P62960 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.28□□□□□ -0.6
Ybx1P62960 Gm13094-201ENSMUST00000117930 409 ntBASIC11.28□□□□□ -0.6
Ybx1P62960 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms