Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.49□□□□□ -0.73
Cdkn2bP55271 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.49□□□□□ -0.73
Cdkn2bP55271 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.49□□□□□ -0.73
Cdkn2bP55271 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm28450-201ENSMUST00000187349 638 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm10774-201ENSMUST00000188689 204 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm37852-201ENSMUST00000193027 350 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm19091-201ENSMUST00000208120 978 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm18042-201ENSMUST00000219887 790 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm1821-202ENSMUST00000227415 750 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm5451-201ENSMUST00000080545 579 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cdkn2bP55271 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.48□□□□□ -0.73
Cdkn2bP55271 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdkn2bP55271 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cdkn2bP55271 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdkn2bP55271 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.47□□□□□ -0.73
Cdkn2bP55271 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdkn2bP55271 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdkn2bP55271 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdkn2bP55271 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdkn2bP55271 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cdkn2bP55271 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Cdkn2bP55271 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cdkn2bP55271 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdkn2bP55271 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.47□□□□□ -0.73
Cdkn2bP55271 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdkn2bP55271 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms