Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd9P40240 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd9P40240 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cd9P40240 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd9P40240 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.86□□□□□ -0.67
Cd9P40240 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd9P40240 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd9P40240 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd9P40240 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd9P40240 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cd9P40240 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cd9P40240 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cd9P40240 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Cd9P40240 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cd9P40240 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.85□□□□□ -0.67
Cd9P40240 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cd9P40240 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cd9P40240 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.85□□□□□ -0.67
Cd9P40240 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.85□□□□□ -0.67
Cd9P40240 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cd9P40240 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.85□□□□□ -0.67
Cd9P40240 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Gm15264-201ENSMUST00000118050 502 ntBASIC10.85□□□□□ -0.67
Cd9P40240 Gm11451-201ENSMUST00000118946 630 ntBASIC10.85□□□□□ -0.67
Cd9P40240 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.85□□□□□ -0.67
Cd9P40240 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.85□□□□□ -0.67
Cd9P40240 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Gm4812-201ENSMUST00000182847 993 ntBASIC10.85□□□□□ -0.67
Cd9P40240 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Gm42816-201ENSMUST00000198433 325 ntBASIC10.85□□□□□ -0.67
Cd9P40240 Gm33080-201ENSMUST00000205429 172 ntBASIC10.85□□□□□ -0.67
Cd9P40240 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.85□□□□□ -0.67
Cd9P40240 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cd9P40240 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.85□□□□□ -0.67
Cd9P40240 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.85□□□□□ -0.67
Cd9P40240 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cd9P40240 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd9P40240 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Cd9P40240 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.84□□□□□ -0.67
Cd9P40240 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Cd9P40240 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.84□□□□□ -0.67
Cd9P40240 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.84□□□□□ -0.67
Cd9P40240 Gm1848-201ENSMUST00000120711 789 ntBASIC10.84□□□□□ -0.67
Cd9P40240 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.84□□□□□ -0.67
Cd9P40240 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.84□□□□□ -0.67
Cd9P40240 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cd9P40240 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Gm43671-201ENSMUST00000200422 433 ntBASIC10.84□□□□□ -0.67
Cd9P40240 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.84□□□□□ -0.67
Cd9P40240 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Cd9P40240 Gm31941-201ENSMUST00000209689 350 ntBASIC10.84□□□□□ -0.67
Cd9P40240 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cd9P40240 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.84□□□□□ -0.67
Cd9P40240 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cd9P40240 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cd9P40240 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Cd9P40240 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cd9P40240 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Cd9P40240 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms