Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.07□□□□□ -0.96
Timp3P39876 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Timp3P39876 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Timp3P39876 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Timp3P39876 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Timp3P39876 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.07□□□□□ -0.96
Timp3P39876 Gm14807-201ENSMUST00000116640 983 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Gm14270-201ENSMUST00000118388 846 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Gm11422-201ENSMUST00000118925 1103 ntBASIC9.07□□□□□ -0.96
Timp3P39876 n-R5s84-201ENSMUST00000122591 109 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC9.07□□□□□ -0.96
Timp3P39876 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC9.07□□□□□ -0.96
Timp3P39876 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.07□□□□□ -0.96
Timp3P39876 Gm22877-201ENSMUST00000175451 105 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.07□□□□□ -0.96
Timp3P39876 Gm3726-201ENSMUST00000203110 785 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.07□□□□□ -0.96
Timp3P39876 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Timp3P39876 Gm45856-201ENSMUST00000212752 416 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Gm9139-201ENSMUST00000218817 700 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Gm3619-201ENSMUST00000219947 775 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Gm5805-201ENSMUST00000072779 456 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Timp3P39876 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.07□□□□□ -0.96
Timp3P39876 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.07□□□□□ -0.96
Timp3P39876 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.07□□□□□ -0.96
Timp3P39876 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Timp3P39876 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Timp3P39876 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Timp3P39876 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Timp3P39876 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Timp3P39876 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.06□□□□□ -0.96
Timp3P39876 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Timp3P39876 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.06□□□□□ -0.96
Timp3P39876 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Timp3P39876 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
Timp3P39876 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC9.06□□□□□ -0.96
Timp3P39876 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.06□□□□□ -0.96
Timp3P39876 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Gm23694-201ENSMUST00000179335 110 ntBASIC9.06□□□□□ -0.96
Timp3P39876 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Timp3P39876 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.06□□□□□ -0.96
Timp3P39876 Gm43163-201ENSMUST00000196571 442 ntBASIC9.06□□□□□ -0.96
Timp3P39876 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.06□□□□□ -0.96
Timp3P39876 Gm44008-201ENSMUST00000204345 412 ntBASIC9.06□□□□□ -0.96
Timp3P39876 Gm18561-201ENSMUST00000206027 804 ntBASIC9.06□□□□□ -0.96
Timp3P39876 Gm45120-201ENSMUST00000208880 408 ntBASIC9.06□□□□□ -0.96
Timp3P39876 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms