Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.54□□□□□ -0.56
Usp4P35123 Gm6867-201ENSMUST00000219165 425 ntBASIC11.54□□□□□ -0.56
Usp4P35123 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.54□□□□□ -0.56
Usp4P35123 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.54□□□□□ -0.56
Usp4P35123 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.54□□□□□ -0.56
Usp4P35123 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.54□□□□□ -0.56
Usp4P35123 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Usp4P35123 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.54□□□□□ -0.56
Usp4P35123 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Usp4P35123 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.54□□□□□ -0.56
Usp4P35123 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Usp4P35123 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Usp4P35123 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.53□□□□□ -0.56
Usp4P35123 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Usp4P35123 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Usp4P35123 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Usp4P35123 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Usp4P35123 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.53□□□□□ -0.56
Usp4P35123 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Usp4P35123 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.53□□□□□ -0.56
Usp4P35123 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Usp4P35123 Gm11663-201ENSMUST00000117888 290 ntBASIC11.53□□□□□ -0.56
Usp4P35123 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.53□□□□□ -0.56
Usp4P35123 Gm8199-201ENSMUST00000121323 823 ntBASIC11.53□□□□□ -0.56
Usp4P35123 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Gm8194-201ENSMUST00000159783 859 ntBASIC11.53□□□□□ -0.56
Usp4P35123 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.53□□□□□ -0.56
Usp4P35123 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Usp4P35123 Mir6546-201ENSMUST00000184460 62 ntBASIC11.53□□□□□ -0.56
Usp4P35123 Gm28686-201ENSMUST00000187404 609 ntBASIC11.53□□□□□ -0.56
Usp4P35123 Gm8285-201ENSMUST00000208293 759 ntBASIC11.53□□□□□ -0.56
Usp4P35123 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.53□□□□□ -0.56
Usp4P35123 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.53□□□□□ -0.56
Usp4P35123 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Usp4P35123 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Usp4P35123 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Usp4P35123 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Usp4P35123 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Usp4P35123 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.53□□□□□ -0.56
Usp4P35123 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Usp4P35123 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.53□□□□□ -0.56
Usp4P35123 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp4P35123 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC11.52□□□□□ -0.56
Usp4P35123 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.52□□□□□ -0.56
Usp4P35123 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Usp4P35123 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.52□□□□□ -0.56
Usp4P35123 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Usp4P35123 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usp4P35123 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Usp4P35123 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usp4P35123 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp4P35123 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.52□□□□□ -0.57
Usp4P35123 Gm25148-201ENSMUST00000104611 123 ntBASIC11.52□□□□□ -0.57
Usp4P35123 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp4P35123 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.52□□□□□ -0.57
Usp4P35123 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp4P35123 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.52□□□□□ -0.57
Usp4P35123 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.52□□□□□ -0.57
Usp4P35123 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp4P35123 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.52□□□□□ -0.57
Usp4P35123 Gm28746-201ENSMUST00000187453 380 ntBASIC11.52□□□□□ -0.57
Usp4P35123 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms