Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Nedd8P29595 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Nedd8P29595 Gm9002-201ENSMUST00000178437 499 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Nedd8P29595 Mir6977-201ENSMUST00000184960 64 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.05□□□□□ -0.8
Nedd8P29595 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.05□□□□□ -0.8
Nedd8P29595 Gm42867-201ENSMUST00000202995 469 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.05□□□□□ -0.8
Nedd8P29595 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Gm4978-201ENSMUST00000071565 801 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Snora73a-201ENSMUST00000082453 205 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Grik1-211ENSMUST00000228188 3221 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Gm42608-201ENSMUST00000197563 2018 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Gm38169-201ENSMUST00000191822 2539 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Nedd8P29595 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Nedd8P29595 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Gm45597-201ENSMUST00000211524 1994 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 CT025639.2-202ENSMUST00000225298 1630 ntBASIC10.04□□□□□ -0.8
Nedd8P29595 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Nedd8P29595 Evc-203ENSMUST00000114154 3695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Nedd8P29595 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.04□□□□□ -0.8
Nedd8P29595 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.04□□□□□ -0.8
Nedd8P29595 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.04□□□□□ -0.8
Nedd8P29595 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.04□□□□□ -0.8
Nedd8P29595 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.04□□□□□ -0.8
Nedd8P29595 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nedd8P29595 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.04□□□□□ -0.8
Nedd8P29595 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.04□□□□□ -0.8
Nedd8P29595 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Nedd8P29595 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Xpo5-201ENSMUST00000087031 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.04□□□□□ -0.8
Nedd8P29595 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.04□□□□□ -0.8
Nedd8P29595 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nedd8P29595 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Nedd8P29595 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Gm38199-201ENSMUST00000192013 3277 ntBASIC10.03□□□□□ -0.8
Nedd8P29595 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Pde11a-201ENSMUST00000099992 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Nedd8P29595 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Gm12015-201ENSMUST00000117065 843 ntBASIC10.03□□□□□ -0.8
Nedd8P29595 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.03□□□□□ -0.8
Nedd8P29595 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC10.03□□□□□ -0.8
Nedd8P29595 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.03□□□□□ -0.8
Nedd8P29595 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.03□□□□□ -0.8
Nedd8P29595 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.03□□□□□ -0.8
Nedd8P29595 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.03□□□□□ -0.8
Nedd8P29595 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms