Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.16□□□□□ -0.94
Col8a2P25318 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Col8a2P25318 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC9.16□□□□□ -0.94
Col8a2P25318 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Col8a2P25318 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC9.16□□□□□ -0.94
Col8a2P25318 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.16□□□□□ -0.94
Col8a2P25318 Gm11340-201ENSMUST00000119226 412 ntBASIC9.16□□□□□ -0.94
Col8a2P25318 Gm11980-201ENSMUST00000121445 986 ntBASIC9.16□□□□□ -0.94
Col8a2P25318 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC9.16□□□□□ -0.94
Col8a2P25318 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC9.16□□□□□ -0.94
Col8a2P25318 Gm22442-201ENSMUST00000157256 144 ntBASIC9.16□□□□□ -0.94
Col8a2P25318 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Gm24809-201ENSMUST00000175318 271 ntBASIC9.16□□□□□ -0.94
Col8a2P25318 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Col8a2P25318 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC9.16□□□□□ -0.94
Col8a2P25318 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC9.16□□□□□ -0.94
Col8a2P25318 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC9.16□□□□□ -0.94
Col8a2P25318 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Col8a2P25318 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC9.16□□□□□ -0.94
Col8a2P25318 AC164429.1-201ENSMUST00000224210 518 ntBASIC9.16□□□□□ -0.94
Col8a2P25318 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.16□□□□□ -0.94
Col8a2P25318 AC134793.1-202ENSMUST00000227444 803 ntBASIC9.16□□□□□ -0.94
Col8a2P25318 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col8a2P25318 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Col8a2P25318 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col8a2P25318 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Col8a2P25318 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Col8a2P25318 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Col8a2P25318 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.16□□□□□ -0.94
Col8a2P25318 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Col8a2P25318 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.15□□□□□ -0.94
Col8a2P25318 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Col8a2P25318 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.15□□□□□ -0.94
Col8a2P25318 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Col8a2P25318 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm25053-201ENSMUST00000103982 133 ntBASIC9.15□□□□□ -0.94
Col8a2P25318 Gm25922-201ENSMUST00000104281 130 ntBASIC9.15□□□□□ -0.94
Col8a2P25318 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm24679-201ENSMUST00000158762 111 ntBASIC9.15□□□□□ -0.94
Col8a2P25318 Gm16165-201ENSMUST00000160140 795 ntBASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 380.1 ms