Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc9P09633 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc9P09633 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc9P09633 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.19□□□□□ -0.14
Hoxc9P09633 Gm45165-201ENSMUST00000207763 1631 ntBASIC14.19□□□□□ -0.14
Hoxc9P09633 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc9P09633 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc9P09633 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hoxc9P09633 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hoxc9P09633 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hoxc9P09633 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.18□□□□□ -0.14
Hoxc9P09633 Gm45719-201ENSMUST00000207954 1662 ntBASIC14.18□□□□□ -0.14
Hoxc9P09633 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC14.18□□□□□ -0.14
Hoxc9P09633 Gm6238-201ENSMUST00000120999 465 ntBASIC14.18□□□□□ -0.14
Hoxc9P09633 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Gm4943-201ENSMUST00000132879 424 ntBASIC14.18□□□□□ -0.14
Hoxc9P09633 Gm24943-201ENSMUST00000158329 433 ntBASIC14.18□□□□□ -0.14
Hoxc9P09633 Mir6973a-201ENSMUST00000183646 78 ntBASIC14.18□□□□□ -0.14
Hoxc9P09633 Gm27444-201ENSMUST00000184157 137 ntBASIC14.18□□□□□ -0.14
Hoxc9P09633 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC14.18□□□□□ -0.14
Hoxc9P09633 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Hoxc9P09633 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc9P09633 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hoxc9P09633 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxc9P09633 AC124732.3-201ENSMUST00000221835 1765 ntBASIC14.17□□□□□ -0.14
Hoxc9P09633 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxc9P09633 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hoxc9P09633 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.17□□□□□ -0.14
Hoxc9P09633 Gm23604-201ENSMUST00000104311 132 ntBASIC14.17□□□□□ -0.14
Hoxc9P09633 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC14.17□□□□□ -0.14
Hoxc9P09633 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC14.17□□□□□ -0.14
Hoxc9P09633 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC14.17□□□□□ -0.14
Hoxc9P09633 Gm38038-201ENSMUST00000193803 259 ntBASIC14.17□□□□□ -0.14
Hoxc9P09633 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC14.17□□□□□ -0.14
Hoxc9P09633 Gm30055-201ENSMUST00000203175 803 ntBASIC14.17□□□□□ -0.14
Hoxc9P09633 AC140314.1-201ENSMUST00000219549 554 ntBASIC14.17□□□□□ -0.14
Hoxc9P09633 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.17□□□□□ -0.14
Hoxc9P09633 AC161172.1-201ENSMUST00000227801 486 ntBASIC14.17□□□□□ -0.14
Hoxc9P09633 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxc9P09633 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxc9P09633 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc9P09633 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hoxc9P09633 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxc9P09633 Gm13104-201ENSMUST00000119651 1446 ntBASIC14.16□□□□□ -0.14
Hoxc9P09633 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hoxc9P09633 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Gm42521-201ENSMUST00000199190 2040 ntBASIC14.16□□□□□ -0.14
Hoxc9P09633 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxc9P09633 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Gm26208-201ENSMUST00000158677 124 ntBASIC14.16□□□□□ -0.14
Hoxc9P09633 Gm4705-201ENSMUST00000177415 354 ntBASIC14.16□□□□□ -0.14
Hoxc9P09633 Gm42588-201ENSMUST00000200538 1297 ntBASIC14.16□□□□□ -0.14
Hoxc9P09633 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms