Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Gm43622-201ENSMUST00000200140 2019 ntBASIC8.9□□□□□ -0.98
P04940 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
P04940 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Gm45675-201ENSMUST00000211202 3429 ntBASIC8.9□□□□□ -0.98
P04940 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Snord23-201ENSMUST00000116828 109 ntBASIC8.9□□□□□ -0.98
P04940 Gm5944-201ENSMUST00000118182 1001 ntBASIC8.9□□□□□ -0.98
P04940 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Gm11451-201ENSMUST00000118946 630 ntBASIC8.9□□□□□ -0.98
P04940 Gm13019-201ENSMUST00000120000 276 ntBASIC8.9□□□□□ -0.98
P04940 Mir1943-201ENSMUST00000158276 73 ntBASIC8.9□□□□□ -0.98
P04940 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
P04940 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Gm44329-201ENSMUST00000197469 112 ntBASIC8.9□□□□□ -0.98
P04940 Gm42816-201ENSMUST00000198433 325 ntBASIC8.9□□□□□ -0.98
P04940 Gm18753-201ENSMUST00000201000 566 ntBASIC8.9□□□□□ -0.98
P04940 Gm43947-201ENSMUST00000203019 959 ntBASIC8.9□□□□□ -0.98
P04940 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC8.9□□□□□ -0.98
P04940 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC8.9□□□□□ -0.98
P04940 Gm9102-201ENSMUST00000219250 465 ntBASIC8.9□□□□□ -0.98
P04940 AC153152.3-201ENSMUST00000222188 1135 ntBASIC8.9□□□□□ -0.98
P04940 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC8.9□□□□□ -0.98
P04940 Gm14267-206ENSMUST00000226870 1209 ntBASIC8.9□□□□□ -0.98
P04940 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
P04940 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC8.9□□□□□ -0.98
P04940 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
P04940 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
P04940 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
P04940 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC8.9□□□□□ -0.99
P04940 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
P04940 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
P04940 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
P04940 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
P04940 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
P04940 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
P04940 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
P04940 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
P04940 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC8.9□□□□□ -0.99
P04940 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC8.9□□□□□ -0.99
P04940 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.99
P04940 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.99
P04940 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
P04940 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
P04940 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC8.89□□□□□ -0.99
P04940 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC8.89□□□□□ -0.99
P04940 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC8.89□□□□□ -0.99
P04940 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
P04940 Gm37580-201ENSMUST00000192408 2800 ntBASIC8.89□□□□□ -0.99
P04940 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC8.89□□□□□ -0.99
P04940 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
P04940 Gm26013-201ENSMUST00000104404 119 ntBASIC8.89□□□□□ -0.99
P04940 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC8.89□□□□□ -0.99
P04940 Gm15264-201ENSMUST00000118050 502 ntBASIC8.89□□□□□ -0.99
P04940 Gm12029-201ENSMUST00000120073 832 ntBASIC8.89□□□□□ -0.99
P04940 Gm14460-201ENSMUST00000121511 639 ntBASIC8.89□□□□□ -0.99
P04940 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC8.89□□□□□ -0.99
P04940 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC8.89□□□□□ -0.99
P04940 Gm24398-201ENSMUST00000157870 109 ntBASIC8.89□□□□□ -0.99
P04940 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC8.89□□□□□ -0.99
P04940 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Gm18827-201ENSMUST00000188341 790 ntBASIC8.89□□□□□ -0.99
P04940 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Gm33080-201ENSMUST00000205429 172 ntBASIC8.89□□□□□ -0.99
P04940 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Gm19091-201ENSMUST00000208120 978 ntBASIC8.89□□□□□ -0.99
P04940 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC8.89□□□□□ -0.99
P04940 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
P04940 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms