Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Gm22495-201ENSMUST00000104492 126 ntBASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Gm25872-201ENSMUST00000177784 100 ntBASIC12.43□□□□□ -0.42
Syngap1F6SEU4 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.43□□□□□ -0.42
Syngap1F6SEU4 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Gm44323-201ENSMUST00000198689 129 ntBASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Gm43249-201ENSMUST00000200464 458 ntBASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 CT025618.1-201ENSMUST00000227409 1279 ntBASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syngap1F6SEU4 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.43□□□□□ -0.42
Syngap1F6SEU4 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.43□□□□□ -0.42
Syngap1F6SEU4 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm6755-201ENSMUST00000100598 864 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm6740-201ENSMUST00000100617 864 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm5071-201ENSMUST00000104922 1035 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm8302-201ENSMUST00000119217 852 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm8464-202ENSMUST00000146697 1142 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm4750-201ENSMUST00000151942 1142 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm24992-201ENSMUST00000157412 130 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm44908-201ENSMUST00000208610 266 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm7242-201ENSMUST00000221134 705 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syngap1F6SEU4 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.41□□□□□ -0.42
Syngap1F6SEU4 Gm14497-201ENSMUST00000119537 580 ntBASIC12.41□□□□□ -0.42
Syngap1F6SEU4 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Syngap1F6SEU4 Gm9372-201ENSMUST00000168454 430 ntBASIC12.41□□□□□ -0.42
Syngap1F6SEU4 Gm38314-201ENSMUST00000195709 625 ntBASIC12.41□□□□□ -0.42
Syngap1F6SEU4 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Syngap1F6SEU4 Gm26782-203ENSMUST00000227103 751 ntBASIC12.41□□□□□ -0.42
Syngap1F6SEU4 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syngap1F6SEU4 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syngap1F6SEU4 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syngap1F6SEU4 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syngap1F6SEU4 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms