Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm44975-201ENSMUST00000207435 1390 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm5046-201ENSMUST00000100608 611 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm24981-201ENSMUST00000104459 132 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm13898-201ENSMUST00000141865 610 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm37141-201ENSMUST00000191938 422 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm8268-201ENSMUST00000209683 458 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm18124-201ENSMUST00000210695 706 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 AC242269.1-201ENSMUST00000227020 741 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Gm12961-201ENSMUST00000120507 1050 ntBASIC11.1□□□□□ -0.63
Col4a6B1AVK5 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Gm29487-201ENSMUST00000190146 256 ntBASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Gm6859-201ENSMUST00000218614 989 ntBASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.1□□□□□ -0.63
Col4a6B1AVK5 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Gm8809-201ENSMUST00000119367 743 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Gm25154-201ENSMUST00000157123 119 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms