Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.9□□□□□ -0.18
Chmp4bQ9D8B3 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp4bQ9D8B3 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp4bQ9D8B3 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Chmp4bQ9D8B3 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp4bQ9D8B3 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC13.9□□□□□ -0.18
Chmp4bQ9D8B3 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Chmp4bQ9D8B3 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Chmp4bQ9D8B3 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gm16071-201ENSMUST00000119589 793 ntBASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gm13284-201ENSMUST00000121020 547 ntBASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Mir1896-201ENSMUST00000122641 81 ntBASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Snord55-201ENSMUST00000174939 79 ntBASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Mir6979-201ENSMUST00000183927 56 ntBASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gm17826-201ENSMUST00000189720 798 ntBASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gm8197-202ENSMUST00000193422 934 ntBASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gm5599-201ENSMUST00000209602 788 ntBASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp4bQ9D8B3 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Gm23771-201ENSMUST00000178702 110 ntBASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp4bQ9D8B3 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.87□□□□□ -0.19
Chmp4bQ9D8B3 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms