Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nop56Q9D6Z1 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.42□□□□□ -0.58
Nop56Q9D6Z1 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.42□□□□□ -0.58
Nop56Q9D6Z1 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nop56Q9D6Z1 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nop56Q9D6Z1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nop56Q9D6Z1 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nop56Q9D6Z1 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nop56Q9D6Z1 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nop56Q9D6Z1 Gm26670-201ENSMUST00000180429 3287 ntBASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 M1ap-201ENSMUST00000113980 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm14127-201ENSMUST00000117906 678 ntBASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm15617-201ENSMUST00000118973 771 ntBASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm15276-201ENSMUST00000145953 498 ntBASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm22846-201ENSMUST00000157706 270 ntBASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm25700-201ENSMUST00000177693 110 ntBASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 AY036118-201ENSMUST00000200021 923 ntBASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm6312-201ENSMUST00000204060 1194 ntBASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm7399-201ENSMUST00000032395 858 ntBASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nop56Q9D6Z1 Gm8036-201ENSMUST00000118089 1718 ntBASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Gm11663-201ENSMUST00000117888 290 ntBASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Mir1896-201ENSMUST00000122641 81 ntBASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Gm8815-201ENSMUST00000173809 620 ntBASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Gm38247-201ENSMUST00000194675 433 ntBASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.4□□□□□ -0.58
Nop56Q9D6Z1 Gm45856-201ENSMUST00000212752 416 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms