Protein–RNA interactions for Protein: Q99PV5

Bhlhe41, Class E basic helix-loop-helix protein 41, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe41Q99PV5 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Bhlhe41Q99PV5 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Bhlhe41Q99PV5 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Bhlhe41Q99PV5 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Bhlhe41Q99PV5 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Bhlhe41Q99PV5 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Bhlhe41Q99PV5 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Bhlhe41Q99PV5 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Bhlhe41Q99PV5 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.08□□□□□ -0.8
Bhlhe41Q99PV5 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Bhlhe41Q99PV5 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Gm13422-201ENSMUST00000118834 504 ntBASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Gm11246-201ENSMUST00000120880 345 ntBASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Gm30946-201ENSMUST00000198288 724 ntBASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Gm8959-201ENSMUST00000213150 571 ntBASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Bhlhe41Q99PV5 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Gm23771-201ENSMUST00000178702 110 ntBASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Gm43520-201ENSMUST00000197996 164 ntBASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Gm45118-201ENSMUST00000208928 825 ntBASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.06□□□□□ -0.8
Bhlhe41Q99PV5 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms