Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm27844-201ENSMUST00000183613 62 ntBASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.38□□□□□ -0.75
Nkd1Q99MH6 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Gm37284-201ENSMUST00000193607 539 ntBASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Spata33-207ENSMUST00000212760 4074 ntBASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm14193-201ENSMUST00000105067 153 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm15595-201ENSMUST00000120840 961 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm11244-201ENSMUST00000121243 237 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm24074-201ENSMUST00000158178 260 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm2383-201ENSMUST00000181461 807 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm37246-201ENSMUST00000192665 835 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 AU022133-201ENSMUST00000200601 873 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm8574-201ENSMUST00000203207 924 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm2517-201ENSMUST00000215651 348 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.37□□□□□ -0.75
Nkd1Q99MH6 AA474408-201ENSMUST00000098110 3339 ntBASIC10.36□□□□□ -0.75
Nkd1Q99MH6 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkd1Q99MH6 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkd1Q99MH6 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.36□□□□□ -0.75
Nkd1Q99MH6 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.36□□□□□ -0.75
Nkd1Q99MH6 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.36□□□□□ -0.75
Nkd1Q99MH6 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkd1Q99MH6 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkd1Q99MH6 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.36□□□□□ -0.75
Nkd1Q99MH6 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms