Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.69□□□□□ -0.54
Clp1Q99LI9 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.69□□□□□ -0.54
Clp1Q99LI9 AC164087.2-201ENSMUST00000216206 1072 ntBASIC11.69□□□□□ -0.54
Clp1Q99LI9 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.69□□□□□ -0.54
Clp1Q99LI9 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Gm5278-201ENSMUST00000055957 552 ntBASIC11.69□□□□□ -0.54
Clp1Q99LI9 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Gm25514-201ENSMUST00000083860 135 ntBASIC11.69□□□□□ -0.54
Clp1Q99LI9 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.69□□□□□ -0.54
Clp1Q99LI9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.69□□□□□ -0.54
Clp1Q99LI9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Gm5764-201ENSMUST00000118817 885 ntBASIC11.68□□□□□ -0.54
Clp1Q99LI9 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.68□□□□□ -0.54
Clp1Q99LI9 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Mir1941-201ENSMUST00000157834 83 ntBASIC11.68□□□□□ -0.54
Clp1Q99LI9 Gm5976-201ENSMUST00000180794 996 ntBASIC11.68□□□□□ -0.54
Clp1Q99LI9 Gm8226-201ENSMUST00000190511 798 ntBASIC11.68□□□□□ -0.54
Clp1Q99LI9 Gm37851-201ENSMUST00000193871 889 ntBASIC11.68□□□□□ -0.54
Clp1Q99LI9 Gm38349-201ENSMUST00000195732 462 ntBASIC11.68□□□□□ -0.54
Clp1Q99LI9 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.68□□□□□ -0.54
Clp1Q99LI9 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 AC101205.2-201ENSMUST00000226206 715 ntBASIC11.68□□□□□ -0.54
Clp1Q99LI9 AC154477.1-201ENSMUST00000226515 773 ntBASIC11.68□□□□□ -0.54
Clp1Q99LI9 AC103672.1-201ENSMUST00000227502 365 ntBASIC11.68□□□□□ -0.54
Clp1Q99LI9 AC137842.2-201ENSMUST00000227734 797 ntBASIC11.68□□□□□ -0.54
Clp1Q99LI9 CT010505.2-201ENSMUST00000227918 998 ntBASIC11.68□□□□□ -0.54
Clp1Q99LI9 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Clp1Q99LI9 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.68□□□□□ -0.54
Clp1Q99LI9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms