Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm23105-201ENSMUST00000083719 134 ntBASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 BC043934-202ENSMUST00000185694 2356 ntBASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Gm13549-201ENSMUST00000118339 796 ntBASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Gm7741-201ENSMUST00000181445 989 ntBASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Gm6722-201ENSMUST00000221586 390 ntBASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Gm4604-201ENSMUST00000025040 390 ntBASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps53Q8CCB4 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.85□□□□□ -0.35
Vps53Q8CCB4 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Gm37826-201ENSMUST00000195329 322 ntBASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Gm42816-201ENSMUST00000198433 325 ntBASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Gm7902-201ENSMUST00000198842 947 ntBASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Gm5996-201ENSMUST00000211110 718 ntBASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Gm45856-201ENSMUST00000212752 416 ntBASIC12.84□□□□□ -0.35
Vps53Q8CCB4 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 399.4 ms