Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Mir1943-201ENSMUST00000158276 73 ntBASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Gm37597-201ENSMUST00000191853 382 ntBASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Gm9369-201ENSMUST00000196009 733 ntBASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Gm44329-201ENSMUST00000197469 112 ntBASIC11.34□□□□□ -0.59
Trub1Q8C0D0 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Gm2875-201ENSMUST00000211333 360 ntBASIC11.34□□□□□ -0.59
Trub1Q8C0D0 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gm16165-201ENSMUST00000160140 795 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gm43380-201ENSMUST00000200421 220 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gm18753-201ENSMUST00000201000 566 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gm45770-201ENSMUST00000212105 616 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trub1Q8C0D0 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 AA474408-201ENSMUST00000098110 3339 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms