Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm32017-201ENSMUST00000215190 1723 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm16202-201ENSMUST00000117532 544 ntBASIC12.78□□□□□ -0.36
Trim35Q8C006 Tspan2-202ENSMUST00000119902 961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC12.78□□□□□ -0.36
Trim35Q8C006 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm14589-201ENSMUST00000121640 727 ntBASIC12.78□□□□□ -0.36
Trim35Q8C006 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim35Q8C006 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.78□□□□□ -0.36
Trim35Q8C006 B230216N24Rik-201ENSMUST00000159324 1140 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Rab26os-201ENSMUST00000176215 477 ntBASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm37869-201ENSMUST00000193385 595 ntBASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm38109-201ENSMUST00000195386 181 ntBASIC12.78□□□□□ -0.36
Trim35Q8C006 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm6477-201ENSMUST00000217098 764 ntBASIC12.78□□□□□ -0.36
Trim35Q8C006 AC116726.2-201ENSMUST00000217629 986 ntBASIC12.78□□□□□ -0.36
Trim35Q8C006 AC133498.1-204ENSMUST00000220830 743 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim35Q8C006 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.78□□□□□ -0.36
Trim35Q8C006 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Olfr1222-201ENSMUST00000099794 936 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.78□□□□□ -0.36
Trim35Q8C006 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.78□□□□□ -0.36
Trim35Q8C006 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim35Q8C006 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim35Q8C006 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim35Q8C006 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trim35Q8C006 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim35Q8C006 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim35Q8C006 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.77□□□□□ -0.36
Trim35Q8C006 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.77□□□□□ -0.36
Trim35Q8C006 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Trim35Q8C006 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim35Q8C006 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim35Q8C006 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trim35Q8C006 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim35Q8C006 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Gm23931-201ENSMUST00000103842 109 ntBASIC12.77□□□□□ -0.37
Trim35Q8C006 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trim35Q8C006 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Gm15125-201ENSMUST00000116185 800 ntBASIC12.77□□□□□ -0.37
Trim35Q8C006 Gm3931-201ENSMUST00000119038 455 ntBASIC12.77□□□□□ -0.37
Trim35Q8C006 Gm13123-201ENSMUST00000122173 492 ntBASIC12.77□□□□□ -0.37
Trim35Q8C006 Gm12317-201ENSMUST00000122307 319 ntBASIC12.77□□□□□ -0.37
Trim35Q8C006 Gm16362-201ENSMUST00000135189 214 ntBASIC12.77□□□□□ -0.37
Trim35Q8C006 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Trim35Q8C006 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Trim35Q8C006 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Gm7672-201ENSMUST00000180915 872 ntBASIC12.77□□□□□ -0.37
Trim35Q8C006 Gm27645-201ENSMUST00000183348 77 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms