Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Gm38002-201ENSMUST00000193255 180 ntBASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.03□□□□□ -0.96
Smco3Q8BQM7 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.03□□□□□ -0.96
Smco3Q8BQM7 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Lpin1-201ENSMUST00000067124 5581 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.96
Smco3Q8BQM7 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Smco3Q8BQM7 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Smco3Q8BQM7 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Smco3Q8BQM7 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.96
Smco3Q8BQM7 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.02□□□□□ -0.96
Smco3Q8BQM7 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Smco3Q8BQM7 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC9.02□□□□□ -0.96
Smco3Q8BQM7 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Smco3Q8BQM7 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Smco3Q8BQM7 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Smco3Q8BQM7 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Smco3Q8BQM7 Atp10d-202ENSMUST00000126664 6052 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 AC156802.2-203ENSMUST00000226032 1906 ntBASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm28042-202ENSMUST00000129685 4472 ntAPPRIS P5 TSL 5 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm11793-201ENSMUST00000120433 981 ntBASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.02□□□□□ -0.97
Smco3Q8BQM7 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm28686-201ENSMUST00000187404 609 ntBASIC9.02□□□□□ -0.97
Smco3Q8BQM7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm6722-201ENSMUST00000221586 390 ntBASIC9.02□□□□□ -0.97
Smco3Q8BQM7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco3Q8BQM7 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
Smco3Q8BQM7 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smco3Q8BQM7 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco3Q8BQM7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smco3Q8BQM7 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Smco3Q8BQM7 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco3Q8BQM7 Mfn2-201ENSMUST00000030884 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco3Q8BQM7 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco3Q8BQM7 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco3Q8BQM7 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms