Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm3372-201ENSMUST00000198806 1792 ntBASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm9701-201ENSMUST00000077976 427 ntBASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Gm25591-201ENSMUST00000177317 94 ntBASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Gm43117-201ENSMUST00000198531 379 ntBASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Gm45893-201ENSMUST00000211899 247 ntBASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 AC164087.2-201ENSMUST00000216206 1072 ntBASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 AC140314.1-201ENSMUST00000219549 554 ntBASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Mir194-2-201ENSMUST00000083648 86 ntBASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Hyal2-206ENSMUST00000195681 2968 ntBASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Gm43625-201ENSMUST00000199177 1539 ntBASIC14.12□□□□□ -0.15
Chd4Q6PDQ2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm13192-201ENSMUST00000101199 208 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm10443-201ENSMUST00000119024 210 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm15815-201ENSMUST00000120569 255 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm11701-201ENSMUST00000121277 1142 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm20568-201ENSMUST00000197129 208 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm43106-201ENSMUST00000199485 637 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm43866-201ENSMUST00000203894 839 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 AC165260.2-201ENSMUST00000225371 395 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm22341-201ENSMUST00000083775 129 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm29358-202ENSMUST00000187941 3227 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm38055-201ENSMUST00000195353 2217 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm12097-201ENSMUST00000121523 1414 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm10344-201ENSMUST00000193498 1419 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms