Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm12481-201ENSMUST00000102482 297 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm12028-201ENSMUST00000118065 436 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Fuom-202ENSMUST00000120034 680 ntTSL 3 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm13543-201ENSMUST00000121230 796 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm15645-202ENSMUST00000183393 1299 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Mir7115-201ENSMUST00000184275 64 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm23908-201ENSMUST00000104599 132 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm8659-201ENSMUST00000120024 1084 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm13217-201ENSMUST00000120466 953 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm24140-201ENSMUST00000122773 326 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm7880-201ENSMUST00000203748 871 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 AC118639.1-202ENSMUST00000226957 653 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 AC107711.3-201ENSMUST00000228939 1035 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm24146-201ENSMUST00000082760 321 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 AC125108.1-201ENSMUST00000218986 2330 ntBASIC8.41□□□□□ -1.06
NipblQ6KCD5 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
NipblQ6KCD5 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC8.4□□□□□ -1.06
NipblQ6KCD5 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Gm25694-201ENSMUST00000175448 282 ntBASIC8.4□□□□□ -1.06
NipblQ6KCD5 Gm6317-201ENSMUST00000183159 1000 ntBASIC8.4□□□□□ -1.06
NipblQ6KCD5 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Gm37678-201ENSMUST00000192908 1146 ntBASIC8.4□□□□□ -1.06
NipblQ6KCD5 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC8.4□□□□□ -1.06
NipblQ6KCD5 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 AC134860.2-201ENSMUST00000225277 1036 ntBASIC8.4□□□□□ -1.06
NipblQ6KCD5 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC8.4□□□□□ -1.06
NipblQ6KCD5 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Gm6157-201ENSMUST00000199935 1897 ntBASIC8.4□□□□□ -1.06
NipblQ6KCD5 AC140209.1-203ENSMUST00000227412 1524 ntBASIC8.4□□□□□ -1.06
NipblQ6KCD5 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Gm6038-201ENSMUST00000154310 948 ntBASIC8.4□□□□□ -1.06
NipblQ6KCD5 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC8.4□□□□□ -1.06
NipblQ6KCD5 Snord55-201ENSMUST00000174939 79 ntBASIC8.4□□□□□ -1.06
NipblQ6KCD5 Mir8091-201ENSMUST00000183602 139 ntBASIC8.4□□□□□ -1.06
NipblQ6KCD5 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms