Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clcn1Q64347 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC14.13□□□□□ -0.15
Clcn1Q64347 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clcn1Q64347 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clcn1Q64347 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Clcn1Q64347 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Clcn1Q64347 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clcn1Q64347 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clcn1Q64347 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clcn1Q64347 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC14.12□□□□□ -0.15
Clcn1Q64347 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC14.12□□□□□ -0.15
Clcn1Q64347 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Gm12129-201ENSMUST00000120104 1147 ntBASIC14.12□□□□□ -0.15
Clcn1Q64347 Gm24380-201ENSMUST00000122696 324 ntBASIC14.12□□□□□ -0.15
Clcn1Q64347 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Gm5529-201ENSMUST00000165691 891 ntBASIC14.12□□□□□ -0.15
Clcn1Q64347 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Gm45072-201ENSMUST00000208673 929 ntBASIC14.12□□□□□ -0.15
Clcn1Q64347 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC14.12□□□□□ -0.15
Clcn1Q64347 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC14.12□□□□□ -0.15
Clcn1Q64347 AC165260.5-201ENSMUST00000224640 1247 ntBASIC14.12□□□□□ -0.15
Clcn1Q64347 CT030135.2-201ENSMUST00000225255 893 ntBASIC14.12□□□□□ -0.15
Clcn1Q64347 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Gm5449-201ENSMUST00000081132 357 ntBASIC14.12□□□□□ -0.15
Clcn1Q64347 Mir326-201ENSMUST00000083637 95 ntBASIC14.12□□□□□ -0.15
Clcn1Q64347 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.12□□□□□ -0.15
Clcn1Q64347 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.12□□□□□ -0.15
Clcn1Q64347 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Clcn1Q64347 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clcn1Q64347 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Gm37613-201ENSMUST00000195677 3580 ntBASIC14.11□□□□□ -0.15
Clcn1Q64347 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Gm25569-201ENSMUST00000157175 131 ntBASIC14.11□□□□□ -0.15
Clcn1Q64347 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.11□□□□□ -0.15
Clcn1Q64347 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Gm42474-201ENSMUST00000201073 505 ntBASIC14.11□□□□□ -0.15
Clcn1Q64347 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms