Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cul4aQ3TCH7 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Spata33-207ENSMUST00000212760 4074 ntBASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Gm9133-201ENSMUST00000118289 540 ntBASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Mir7686-201ENSMUST00000200604 57 ntBASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
Cul4aQ3TCH7 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Cul4aQ3TCH7 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cul4aQ3TCH7 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cul4aQ3TCH7 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cul4aQ3TCH7 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.52□□□□□ -0.56
Cul4aQ3TCH7 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cul4aQ3TCH7 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cul4aQ3TCH7 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cul4aQ3TCH7 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cul4aQ3TCH7 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cul4aQ3TCH7 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Gm12217-201ENSMUST00000118858 696 ntBASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Gm12986-201ENSMUST00000119037 967 ntBASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Gm11956-201ENSMUST00000119525 512 ntBASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Gm23699-201ENSMUST00000158835 135 ntBASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Gm23045-201ENSMUST00000175041 96 ntBASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.52□□□□□ -0.57
Cul4aQ3TCH7 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms