Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 Osmr-204ENSMUST00000176826 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm8131-201ENSMUST00000213783 1570 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm44189-201ENSMUST00000204387 3083 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 3930402G23Rik-201ENSMUST00000040608 3086 ntTSL 2 BASIC9□□□□□ -0.97
Trim63Q38HM4 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Trim63Q38HM4 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Coro7-201ENSMUST00000038552 4296 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Trim63Q38HM4 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trim63Q38HM4 5430416N02Rik-201ENSMUST00000180779 3486 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trim63Q38HM4 Wdhd1-201ENSMUST00000111790 2962 ntTSL 2 BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm5687-201ENSMUST00000118252 640 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Trim63Q38HM4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC9□□□□□ -0.97
Trim63Q38HM4 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm15895-201ENSMUST00000157018 731 ntTSL 3 BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm25911-201ENSMUST00000157621 56 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm5370-201ENSMUST00000187187 574 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 Gm42929-201ENSMUST00000198374 1286 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 Gm18711-201ENSMUST00000199341 750 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC9□□□□□ -0.97
Trim63Q38HM4 AC140397.2-201ENSMUST00000224213 834 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm8399-201ENSMUST00000082300 1117 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm28775-201ENSMUST00000186918 2167 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Mill2-206ENSMUST00000228493 2043 ntAPPRIS P4 BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm6831-202ENSMUST00000213025 1673 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 Peg13-201ENSMUST00000202826 4725 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC9□□□□□ -0.97
Trim63Q38HM4 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Trim63Q38HM4 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Olfm4-203ENSMUST00000228749 2801 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Krt78-201ENSMUST00000164932 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Wdr6-201ENSMUST00000068700 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Gm44753-201ENSMUST00000207739 2335 ntTSL 5 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Gm26903-201ENSMUST00000180749 4583 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Fxr1-208ENSMUST00000200392 3014 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Grik1-211ENSMUST00000228188 3221 ntBASIC8.99□□□□□ -0.97
Trim63Q38HM4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Gm11618-201ENSMUST00000117946 267 ntBASIC8.99□□□□□ -0.97
Trim63Q38HM4 Gm4875-201ENSMUST00000118257 786 ntBASIC8.99□□□□□ -0.97
Trim63Q38HM4 Gm13689-201ENSMUST00000119360 685 ntBASIC8.99□□□□□ -0.97
Trim63Q38HM4 Gm11424-201ENSMUST00000121929 829 ntBASIC8.99□□□□□ -0.97
Trim63Q38HM4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC8.99□□□□□ -0.97
Trim63Q38HM4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Gm7730-201ENSMUST00000212486 454 ntBASIC8.99□□□□□ -0.97
Trim63Q38HM4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 AC134254.1-201ENSMUST00000221362 167 ntBASIC8.99□□□□□ -0.97
Trim63Q38HM4 AC225888.1-201ENSMUST00000227184 728 ntBASIC8.99□□□□□ -0.97
Trim63Q38HM4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Gm15496-201ENSMUST00000129578 2456 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Dcx-202ENSMUST00000087313 3120 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Gm45867-201ENSMUST00000208201 2317 ntBASIC8.99□□□□□ -0.97
Trim63Q38HM4 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim63Q38HM4 Glp2r-201ENSMUST00000021289 1738 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms