Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Smn1P97801 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
Smn1P97801 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Smn1P97801 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.4□□□□□ -0.9
Smn1P97801 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.4□□□□□ -0.9
Smn1P97801 Gm15374-201ENSMUST00000119313 844 ntBASIC9.4□□□□□ -0.9
Smn1P97801 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 Gm13263-201ENSMUST00000121271 838 ntBASIC9.4□□□□□ -0.9
Smn1P97801 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.4□□□□□ -0.9
Smn1P97801 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Smn1P97801 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smn1P97801 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.4□□□□□ -0.9
Smn1P97801 Gm28746-201ENSMUST00000187453 380 ntBASIC9.4□□□□□ -0.9
Smn1P97801 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC9.4□□□□□ -0.9
Smn1P97801 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Smn1P97801 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.4□□□□□ -0.9
Smn1P97801 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Smn1P97801 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Smn1P97801 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Smn1P97801 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smn1P97801 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.4□□□□□ -0.91
Smn1P97801 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Smn1P97801 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smn1P97801 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smn1P97801 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smn1P97801 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Smn1P97801 Gm33366-201ENSMUST00000195583 3827 ntBASIC9.4□□□□□ -0.91
Smn1P97801 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Smn1P97801 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smn1P97801 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smn1P97801 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smn1P97801 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Smn1P97801 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.4□□□□□ -0.91
Smn1P97801 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.39□□□□□ -0.91
Smn1P97801 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
Smn1P97801 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Smn1P97801 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Smn1P97801 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Smn1P97801 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
Smn1P97801 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Smn1P97801 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Smn1P97801 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Smn1P97801 Gm14723-201ENSMUST00000118686 215 ntBASIC9.39□□□□□ -0.91
Smn1P97801 Gm13461-201ENSMUST00000120980 662 ntBASIC9.39□□□□□ -0.91
Smn1P97801 Gm8199-201ENSMUST00000121323 823 ntBASIC9.39□□□□□ -0.91
Smn1P97801 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.39□□□□□ -0.91
Smn1P97801 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Smn1P97801 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Smn1P97801 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC9.39□□□□□ -0.91
Smn1P97801 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.39□□□□□ -0.91
Smn1P97801 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.39□□□□□ -0.91
Smn1P97801 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.39□□□□□ -0.91
Smn1P97801 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.39□□□□□ -0.91
Smn1P97801 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Smn1P97801 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.39□□□□□ -0.91
Smn1P97801 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.39□□□□□ -0.91
Smn1P97801 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC9.39□□□□□ -0.91
Smn1P97801 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC9.39□□□□□ -0.91
Smn1P97801 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Smn1P97801 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC9.39□□□□□ -0.91
Smn1P97801 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Smn1P97801 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Smn1P97801 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.39□□□□□ -0.91
Smn1P97801 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smn1P97801 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 125.7 ms