Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarcc1P97496 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13.83□□□□□ -0.2
Smarcc1P97496 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC13.83□□□□□ -0.2
Smarcc1P97496 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarcc1P97496 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarcc1P97496 Gm43866-201ENSMUST00000203894 839 ntBASIC13.83□□□□□ -0.2
Smarcc1P97496 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 AC117769.1-201ENSMUST00000224716 1120 ntBASIC13.83□□□□□ -0.2
Smarcc1P97496 BX649293.1-201ENSMUST00000227437 631 ntBASIC13.83□□□□□ -0.2
Smarcc1P97496 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smarcc1P97496 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smarcc1P97496 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Smarcc1P97496 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smarcc1P97496 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smarcc1P97496 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Gm45124-201ENSMUST00000206723 2755 ntBASIC13.83□□□□□ -0.2
Smarcc1P97496 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smarcc1P97496 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Smarcc1P97496 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Gm18555-201ENSMUST00000197935 584 ntBASIC13.82□□□□□ -0.2
Smarcc1P97496 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC13.82□□□□□ -0.2
Smarcc1P97496 Gm45745-201ENSMUST00000211447 1180 ntBASIC13.82□□□□□ -0.2
Smarcc1P97496 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC13.82□□□□□ -0.2
Smarcc1P97496 Gm3926-201ENSMUST00000223378 1123 ntBASIC13.82□□□□□ -0.2
Smarcc1P97496 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Smarcc1P97496 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Smarcc1P97496 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Smarcc1P97496 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Smarcc1P97496 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Smarcc1P97496 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcc1P97496 Gm8873-201ENSMUST00000217847 1439 ntBASIC13.81□□□□□ -0.2
Smarcc1P97496 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Smarcc1P97496 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smarcc1P97496 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smarcc1P97496 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Gm13426-201ENSMUST00000117887 795 ntBASIC13.81□□□□□ -0.2
Smarcc1P97496 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC13.81□□□□□ -0.2
Smarcc1P97496 Gm26174-201ENSMUST00000158415 219 ntBASIC13.81□□□□□ -0.2
Smarcc1P97496 Gm16228-201ENSMUST00000162286 809 ntBASIC13.81□□□□□ -0.2
Smarcc1P97496 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.81□□□□□ -0.2
Smarcc1P97496 Gm26875-201ENSMUST00000181006 950 ntBASIC13.81□□□□□ -0.2
Smarcc1P97496 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC13.81□□□□□ -0.2
Smarcc1P97496 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Smarcc1P97496 Platr10-202ENSMUST00000191479 818 ntBASIC13.81□□□□□ -0.2
Smarcc1P97496 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC13.81□□□□□ -0.2
Smarcc1P97496 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcc1P97496 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC13.81□□□□□ -0.2
Smarcc1P97496 AC140314.1-201ENSMUST00000219549 554 ntBASIC13.81□□□□□ -0.2
Smarcc1P97496 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.81□□□□□ -0.2
Smarcc1P97496 AC107711.4-201ENSMUST00000228948 440 ntBASIC13.81□□□□□ -0.2
Smarcc1P97496 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms