Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.23□□□□□ -0.77
Cacna1aP97445 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.23□□□□□ -0.77
Cacna1aP97445 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC10.23□□□□□ -0.77
Cacna1aP97445 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Cacna1aP97445 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.23□□□□□ -0.77
Cacna1aP97445 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Cacna1aP97445 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Gm8873-201ENSMUST00000217847 1439 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Gm13456-201ENSMUST00000118928 1365 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cacna1aP97445 Gm5071-201ENSMUST00000104922 1035 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 Gm7805-201ENSMUST00000154348 448 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Mir3091-201ENSMUST00000175086 76 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC10.23□□□□□ -0.77
Cacna1aP97445 Gm38145-201ENSMUST00000192319 693 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 AC107752.1-201ENSMUST00000219362 469 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 AC154461.1-201ENSMUST00000224207 1005 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cacna1aP97445 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.23□□□□□ -0.77
Cacna1aP97445 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Cacna1aP97445 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Gm11540-201ENSMUST00000117457 780 ntBASIC10.22□□□□□ -0.77
Cacna1aP97445 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.22□□□□□ -0.77
Cacna1aP97445 Gm24312-201ENSMUST00000178677 119 ntBASIC10.22□□□□□ -0.77
Cacna1aP97445 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.22□□□□□ -0.77
Cacna1aP97445 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.22□□□□□ -0.77
Cacna1aP97445 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.22□□□□□ -0.77
Cacna1aP97445 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.22□□□□□ -0.77
Cacna1aP97445 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC10.22□□□□□ -0.77
Cacna1aP97445 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Gm23432-201ENSMUST00000157181 131 ntBASIC10.22□□□□□ -0.77
Cacna1aP97445 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Gm8601-201ENSMUST00000182096 909 ntBASIC10.22□□□□□ -0.77
Cacna1aP97445 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Gm7880-201ENSMUST00000203748 871 ntBASIC10.22□□□□□ -0.77
Cacna1aP97445 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cacna1aP97445 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cacna1aP97445 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.22□□□□□ -0.77
Cacna1aP97445 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms