Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn2bP55271 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.5□□□□□ -0.73
Cdkn2bP55271 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Gm11836-201ENSMUST00000121022 441 ntBASIC10.5□□□□□ -0.73
Cdkn2bP55271 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Gm7666-201ENSMUST00000146631 819 ntBASIC10.5□□□□□ -0.73
Cdkn2bP55271 Mir1938-201ENSMUST00000158746 100 ntBASIC10.5□□□□□ -0.73
Cdkn2bP55271 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Gm30946-201ENSMUST00000198288 724 ntBASIC10.5□□□□□ -0.73
Cdkn2bP55271 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Gm23105-201ENSMUST00000083719 134 ntBASIC10.5□□□□□ -0.73
Cdkn2bP55271 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cdkn2bP55271 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gm23200-201ENSMUST00000104379 132 ntBASIC10.49□□□□□ -0.73
Cdkn2bP55271 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gm15352-201ENSMUST00000118696 270 ntBASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.49□□□□□ -0.73
Cdkn2bP55271 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn2bP55271 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms