Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pdx1P52946 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.88□□□□□ -0.67
Pdx1P52946 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Pdx1P52946 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.87□□□□□ -0.67
Pdx1P52946 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.87□□□□□ -0.67
Pdx1P52946 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.87□□□□□ -0.67
Pdx1P52946 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pdx1P52946 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.87□□□□□ -0.67
Pdx1P52946 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC10.87□□□□□ -0.67
Pdx1P52946 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.87□□□□□ -0.67
Pdx1P52946 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.87□□□□□ -0.67
Pdx1P52946 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC10.87□□□□□ -0.67
Pdx1P52946 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Pdx1P52946 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.87□□□□□ -0.67
Pdx1P52946 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.87□□□□□ -0.67
Pdx1P52946 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.87□□□□□ -0.67
Pdx1P52946 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.87□□□□□ -0.67
Pdx1P52946 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.87□□□□□ -0.67
Pdx1P52946 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.87□□□□□ -0.67
Pdx1P52946 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.87□□□□□ -0.67
Pdx1P52946 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Pdx1P52946 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdx1P52946 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pdx1P52946 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Pdx1P52946 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pdx1P52946 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Pdx1P52946 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pdx1P52946 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pdx1P52946 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.86□□□□□ -0.67
Pdx1P52946 Gm11952-201ENSMUST00000121172 821 ntBASIC10.86□□□□□ -0.67
Pdx1P52946 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Gm16165-201ENSMUST00000160140 795 ntBASIC10.86□□□□□ -0.67
Pdx1P52946 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Pdx1P52946 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.86□□□□□ -0.67
Pdx1P52946 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.86□□□□□ -0.67
Pdx1P52946 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.86□□□□□ -0.67
Pdx1P52946 Gm34023-201ENSMUST00000195539 217 ntBASIC10.86□□□□□ -0.67
Pdx1P52946 Gm5100-201ENSMUST00000195631 589 ntBASIC10.86□□□□□ -0.67
Pdx1P52946 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Gm9102-201ENSMUST00000219250 465 ntBASIC10.86□□□□□ -0.67
Pdx1P52946 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.86□□□□□ -0.67
Pdx1P52946 Gm29787-201ENSMUST00000222129 849 ntBASIC10.86□□□□□ -0.67
Pdx1P52946 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Pdx1P52946 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Pdx1P52946 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.86□□□□□ -0.67
Pdx1P52946 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pdx1P52946 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Pdx1P52946 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.86□□□□□ -0.67
Pdx1P52946 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms