Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
ClgnP52194 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
ClgnP52194 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Gm22144-201ENSMUST00000157402 102 ntBASIC11.3□□□□□ -0.6
ClgnP52194 Gm26461-201ENSMUST00000175064 290 ntBASIC11.3□□□□□ -0.6
ClgnP52194 Gm37284-201ENSMUST00000193607 539 ntBASIC11.3□□□□□ -0.6
ClgnP52194 Gm37981-201ENSMUST00000194280 535 ntBASIC11.3□□□□□ -0.6
ClgnP52194 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.3□□□□□ -0.6
ClgnP52194 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
ClgnP52194 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
ClgnP52194 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
ClgnP52194 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC11.3□□□□□ -0.6
ClgnP52194 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.3□□□□□ -0.6
ClgnP52194 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
ClgnP52194 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClgnP52194 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.29□□□□□ -0.6
ClgnP52194 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ClgnP52194 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
ClgnP52194 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
ClgnP52194 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.29□□□□□ -0.6
ClgnP52194 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.29□□□□□ -0.6
ClgnP52194 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
ClgnP52194 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
ClgnP52194 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
ClgnP52194 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.29□□□□□ -0.6
ClgnP52194 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.29□□□□□ -0.6
ClgnP52194 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.29□□□□□ -0.6
ClgnP52194 Olfml3-204ENSMUST00000169286 874 ntBASIC11.29□□□□□ -0.6
ClgnP52194 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.29□□□□□ -0.6
ClgnP52194 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ClgnP52194 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.29□□□□□ -0.6
ClgnP52194 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.29□□□□□ -0.6
ClgnP52194 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
ClgnP52194 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
ClgnP52194 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
ClgnP52194 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.29□□□□□ -0.6
ClgnP52194 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.29□□□□□ -0.6
ClgnP52194 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.29□□□□□ -0.6
ClgnP52194 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.29□□□□□ -0.6
ClgnP52194 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.29□□□□□ -0.6
ClgnP52194 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
ClgnP52194 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.29□□□□□ -0.6
ClgnP52194 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClgnP52194 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
ClgnP52194 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
ClgnP52194 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
ClgnP52194 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.28□□□□□ -0.6
ClgnP52194 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
ClgnP52194 AC115891.3-201ENSMUST00000219161 2472 ntBASIC11.28□□□□□ -0.6
ClgnP52194 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClgnP52194 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms