Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.64□□□□□ -0.55
Shmt1P50431 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Shmt1P50431 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.64□□□□□ -0.55
Shmt1P50431 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Shmt1P50431 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shmt1P50431 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Shmt1P50431 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Shmt1P50431 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.63□□□□□ -0.55
Shmt1P50431 Gm13351-201ENSMUST00000118087 414 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.63□□□□□ -0.55
Shmt1P50431 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Gm25830-201ENSMUST00000158923 132 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Gm28032-201ENSMUST00000184104 96 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.63□□□□□ -0.55
Shmt1P50431 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.63□□□□□ -0.55
Shmt1P50431 Gm7880-201ENSMUST00000203748 871 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 Gm43912-201ENSMUST00000204352 538 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 Gm2594-201ENSMUST00000214774 742 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 Gm9487-201ENSMUST00000216600 472 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Shmt1P50431 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Shmt1P50431 Gm8181-201ENSMUST00000062242 669 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Shmt1P50431 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Shmt1P50431 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.63□□□□□ -0.55
Shmt1P50431 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.63□□□□□ -0.55
Shmt1P50431 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shmt1P50431 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Shmt1P50431 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.62□□□□□ -0.55
Shmt1P50431 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.62□□□□□ -0.55
Shmt1P50431 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.62□□□□□ -0.55
Shmt1P50431 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Shmt1P50431 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.62□□□□□ -0.55
Shmt1P50431 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Shmt1P50431 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.62□□□□□ -0.55
Shmt1P50431 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Gm14165-201ENSMUST00000121456 952 ntBASIC11.62□□□□□ -0.55
Shmt1P50431 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.62□□□□□ -0.55
Shmt1P50431 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.62□□□□□ -0.55
Shmt1P50431 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Gm24074-201ENSMUST00000158178 260 ntBASIC11.62□□□□□ -0.55
Shmt1P50431 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.62□□□□□ -0.55
Shmt1P50431 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Shmt1P50431 Gm42660-201ENSMUST00000197733 947 ntBASIC11.62□□□□□ -0.55
Shmt1P50431 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.62□□□□□ -0.55
Shmt1P50431 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.62□□□□□ -0.55
Shmt1P50431 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms