Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC10.93□□□□□ -0.66
Sox18P43680 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Sox18P43680 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC10.93□□□□□ -0.66
Sox18P43680 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.93□□□□□ -0.66
Sox18P43680 AC174797.2-201ENSMUST00000225835 165 ntBASIC10.93□□□□□ -0.66
Sox18P43680 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sox18P43680 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sox18P43680 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sox18P43680 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sox18P43680 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sox18P43680 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sox18P43680 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 Cntnap2-201ENSMUST00000060839 1540 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sox18P43680 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Sox18P43680 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Sox18P43680 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sox18P43680 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Sox18P43680 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 AC153959.1-201ENSMUST00000213617 1694 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox18P43680 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sox18P43680 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sox18P43680 Gm23769-201ENSMUST00000104441 121 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Gm12418-201ENSMUST00000118116 942 ntBASIC10.92□□□□□ -0.66
Sox18P43680 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Gm16219-201ENSMUST00000120096 274 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Gm15197-201ENSMUST00000120526 478 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Gm14165-201ENSMUST00000121456 952 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Gm5395-201ENSMUST00000121650 915 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Gm26238-201ENSMUST00000175538 117 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Krtap22-2-201ENSMUST00000178913 380 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sox18P43680 Gm26976-201ENSMUST00000182929 908 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Gm29808-201ENSMUST00000194419 468 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Gm42599-201ENSMUST00000201308 469 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Gm9487-201ENSMUST00000216600 472 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Gm18043-201ENSMUST00000216741 739 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Gm8768-201ENSMUST00000220020 826 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Gm18387-201ENSMUST00000220333 702 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox18P43680 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sox18P43680 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sox18P43680 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sox18P43680 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox18P43680 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox18P43680 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Sox18P43680 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sox18P43680 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sox18P43680 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Sox18P43680 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.92□□□□□ -0.66
Sox18P43680 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sox18P43680 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox18P43680 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Sox18P43680 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms