Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Upk2P38575 Gm25766-201ENSMUST00000104101 131 ntBASIC9.64□□□□□ -0.87
Upk2P38575 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Upk2P38575 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Upk2P38575 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.64□□□□□ -0.87
Upk2P38575 Gm12663-201ENSMUST00000118481 958 ntBASIC9.64□□□□□ -0.87
Upk2P38575 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.64□□□□□ -0.87
Upk2P38575 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC9.64□□□□□ -0.87
Upk2P38575 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Gm16165-201ENSMUST00000160140 795 ntBASIC9.64□□□□□ -0.87
Upk2P38575 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.64□□□□□ -0.87
Upk2P38575 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.64□□□□□ -0.87
Upk2P38575 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.64□□□□□ -0.87
Upk2P38575 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.64□□□□□ -0.87
Upk2P38575 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.64□□□□□ -0.87
Upk2P38575 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.64□□□□□ -0.87
Upk2P38575 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.64□□□□□ -0.87
Upk2P38575 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Upk2P38575 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Upk2P38575 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Upk2P38575 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Upk2P38575 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.64□□□□□ -0.87
Upk2P38575 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Upk2P38575 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.63□□□□□ -0.87
Upk2P38575 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.63□□□□□ -0.87
Upk2P38575 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.63□□□□□ -0.87
Upk2P38575 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.63□□□□□ -0.87
Upk2P38575 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Upk2P38575 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Upk2P38575 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Upk2P38575 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Upk2P38575 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Upk2P38575 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.63□□□□□ -0.87
Upk2P38575 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.63□□□□□ -0.87
Upk2P38575 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.63□□□□□ -0.87
Upk2P38575 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Gm25554-201ENSMUST00000158075 113 ntBASIC9.63□□□□□ -0.87
Upk2P38575 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.63□□□□□ -0.87
Upk2P38575 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.63□□□□□ -0.87
Upk2P38575 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.63□□□□□ -0.87
Upk2P38575 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.63□□□□□ -0.87
Upk2P38575 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Upk2P38575 Gm9463-201ENSMUST00000206707 601 ntBASIC9.63□□□□□ -0.87
Upk2P38575 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.63□□□□□ -0.87
Upk2P38575 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.63□□□□□ -0.87
Upk2P38575 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.63□□□□□ -0.87
Upk2P38575 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9.63□□□□□ -0.87
Upk2P38575 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 138.2 ms