Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Nedd8P29595 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Gm10312-201ENSMUST00000078515 489 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Nedd8P29595 D030055H07Rik-201ENSMUST00000143956 2712 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Bloc1s6-201ENSMUST00000005954 3484 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Gm37759-201ENSMUST00000194155 3246 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Nedd8P29595 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Nedd8P29595 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Nedd8P29595 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Dock7-201ENSMUST00000030286 7127 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Nedd8P29595 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Gm44062-201ENSMUST00000203312 4857 ntBASIC10.06□□□□□ -0.8
Nedd8P29595 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Nedd8P29595 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.06□□□□□ -0.8
Nedd8P29595 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Nedd8P29595 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.06□□□□□ -0.8
Nedd8P29595 Gm15264-201ENSMUST00000118050 502 ntBASIC10.06□□□□□ -0.8
Nedd8P29595 Gm6023-201ENSMUST00000118217 606 ntBASIC10.06□□□□□ -0.8
Nedd8P29595 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.06□□□□□ -0.8
Nedd8P29595 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Gm29127-201ENSMUST00000188304 517 ntBASIC10.06□□□□□ -0.8
Nedd8P29595 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.06□□□□□ -0.8
Nedd8P29595 Gm6745-201ENSMUST00000199216 526 ntBASIC10.06□□□□□ -0.8
Nedd8P29595 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.06□□□□□ -0.8
Nedd8P29595 Gm40466-201ENSMUST00000212174 422 ntBASIC10.06□□□□□ -0.8
Nedd8P29595 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.06□□□□□ -0.8
Nedd8P29595 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.06□□□□□ -0.8
Nedd8P29595 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Dido1-205ENSMUST00000103056 4281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Rbm10-203ENSMUST00000084383 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.06□□□□□ -0.8
Nedd8P29595 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Nedd8P29595 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Nedd8P29595 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Nedd8P29595 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 AC165080.1-201ENSMUST00000215257 3123 ntBASIC10.06□□□□□ -0.8
Nedd8P29595 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nedd8P29595 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC10.05□□□□□ -0.8
Nedd8P29595 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Nedd8P29595 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Ssrp1-209ENSMUST00000168266 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Nedd8P29595 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Nedd8P29595 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nedd8P29595 Mir1247-201ENSMUST00000116706 82 ntBASIC10.05□□□□□ -0.8
Nedd8P29595 Gm14928-201ENSMUST00000120198 477 ntBASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms