Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.81□□□□□ -0.84
P20040 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.81□□□□□ -0.84
P20040 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.81□□□□□ -0.84
P20040 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
P20040 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
P20040 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
P20040 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
P20040 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
P20040 Gm22711-201ENSMUST00000116890 133 ntBASIC9.8□□□□□ -0.84
P20040 Gm15131-201ENSMUST00000119124 595 ntBASIC9.8□□□□□ -0.84
P20040 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.8□□□□□ -0.84
P20040 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.8□□□□□ -0.84
P20040 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Gm8459-201ENSMUST00000162504 760 ntBASIC9.8□□□□□ -0.84
P20040 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
P20040 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.8□□□□□ -0.84
P20040 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC9.8□□□□□ -0.84
P20040 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
P20040 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.8□□□□□ -0.84
P20040 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
P20040 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.8□□□□□ -0.84
P20040 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.8□□□□□ -0.84
P20040 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P20040 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
P20040 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
P20040 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.79□□□□□ -0.84
P20040 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.79□□□□□ -0.84
P20040 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.79□□□□□ -0.84
P20040 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.79□□□□□ -0.84
P20040 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
P20040 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.79□□□□□ -0.84
P20040 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
P20040 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC9.79□□□□□ -0.84
P20040 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.79□□□□□ -0.84
P20040 Gm3508-201ENSMUST00000186012 792 ntBASIC9.79□□□□□ -0.84
P20040 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.79□□□□□ -0.84
P20040 Gm43186-201ENSMUST00000198130 824 ntBASIC9.79□□□□□ -0.84
P20040 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC9.79□□□□□ -0.84
P20040 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC9.79□□□□□ -0.84
P20040 Gm45770-201ENSMUST00000212105 616 ntBASIC9.79□□□□□ -0.84
P20040 Gm2517-201ENSMUST00000215651 348 ntBASIC9.79□□□□□ -0.84
P20040 Gm4797-201ENSMUST00000219075 1283 ntBASIC9.79□□□□□ -0.84
P20040 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC9.79□□□□□ -0.84
P20040 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.79□□□□□ -0.84
P20040 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Gm10179-201ENSMUST00000086233 688 ntBASIC9.79□□□□□ -0.84
P20040 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms