Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04213 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04213 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
P04213 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
P04213 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04213 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.53□□□□□ -0.72
P04213 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04213 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04213 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04213 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
P04213 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04213 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04213 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.53□□□□□ -0.72
P04213 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P04213 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
P04213 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
P04213 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P04213 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
P04213 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
P04213 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
P04213 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.52□□□□□ -0.73
P04213 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
P04213 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P04213 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Gm23061-201ENSMUST00000102348 116 ntBASIC10.52□□□□□ -0.73
P04213 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.52□□□□□ -0.73
P04213 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.52□□□□□ -0.73
P04213 Gm3828-201ENSMUST00000121817 257 ntBASIC10.52□□□□□ -0.73
P04213 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.52□□□□□ -0.73
P04213 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.52□□□□□ -0.73
P04213 Gm15881-201ENSMUST00000148792 942 ntBASIC10.52□□□□□ -0.73
P04213 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P04213 Gm7255-201ENSMUST00000187371 908 ntBASIC10.52□□□□□ -0.73
P04213 Gm43520-201ENSMUST00000197996 164 ntBASIC10.52□□□□□ -0.73
P04213 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.52□□□□□ -0.73
P04213 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.52□□□□□ -0.73
P04213 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
P04213 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
P04213 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P04213 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.52□□□□□ -0.73
P04213 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.52□□□□□ -0.73
P04213 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.52□□□□□ -0.73
P04213 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04213 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
P04213 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.51□□□□□ -0.73
P04213 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
P04213 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Gm12663-201ENSMUST00000118481 958 ntBASIC10.51□□□□□ -0.73
P04213 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.51□□□□□ -0.73
P04213 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.51□□□□□ -0.73
P04213 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.51□□□□□ -0.73
P04213 Gm6485-201ENSMUST00000160676 439 ntBASIC10.51□□□□□ -0.73
P04213 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
P04213 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.51□□□□□ -0.73
P04213 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.51□□□□□ -0.73
P04213 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.51□□□□□ -0.73
P04213 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.51□□□□□ -0.73
P04213 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
P04213 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
P04213 Gm25580-201ENSMUST00000083409 327 ntBASIC10.51□□□□□ -0.73
P04213 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
P04213 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
P04213 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04213 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.51□□□□□ -0.73
P04213 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms