Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
TcraP01849 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC8.02□□□□□ -1.13
TcraP01849 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Gm37048-201ENSMUST00000194827 5578 ntBASIC8.02□□□□□ -1.13
TcraP01849 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
TcraP01849 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Gm10152-201ENSMUST00000193475 1344 ntBASIC8.02□□□□□ -1.13
TcraP01849 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
TcraP01849 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
TcraP01849 Gm43307-201ENSMUST00000199465 2371 ntBASIC8.02□□□□□ -1.13
TcraP01849 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
TcraP01849 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC8.01□□□□□ -1.13
TcraP01849 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
TcraP01849 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
TcraP01849 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
TcraP01849 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC8.01□□□□□ -1.13
TcraP01849 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
TcraP01849 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Gm13392-201ENSMUST00000117708 150 ntBASIC8.01□□□□□ -1.13
TcraP01849 Gm14071-201ENSMUST00000117817 509 ntBASIC8.01□□□□□ -1.13
TcraP01849 Gm8876-201ENSMUST00000120768 1122 ntBASIC8.01□□□□□ -1.13
TcraP01849 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC8.01□□□□□ -1.13
TcraP01849 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC8.01□□□□□ -1.13
TcraP01849 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC8.01□□□□□ -1.13
TcraP01849 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
TcraP01849 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Gm32111-201ENSMUST00000207689 846 ntBASIC8.01□□□□□ -1.13
TcraP01849 AC141438.2-201ENSMUST00000215068 271 ntBASIC8.01□□□□□ -1.13
TcraP01849 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
TcraP01849 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
TcraP01849 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
TcraP01849 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
TcraP01849 Gm43807-201ENSMUST00000200678 1781 ntBASIC8.01□□□□□ -1.13
TcraP01849 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC8.01□□□□□ -1.13
TcraP01849 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Gm37593-201ENSMUST00000191669 3254 ntBASIC8.01□□□□□ -1.13
TcraP01849 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC8.01□□□□□ -1.13
TcraP01849 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 AC160340.2-201ENSMUST00000220812 3675 ntBASIC8.01□□□□□ -1.13
TcraP01849 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Gm9271-201ENSMUST00000185988 2580 ntBASIC8.01□□□□□ -1.13
TcraP01849 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TcraP01849 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
TcraP01849 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC8□□□□□ -1.13
TcraP01849 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC8□□□□□ -1.13
TcraP01849 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms