Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 AC165260.2-201ENSMUST00000225371 395 ntBASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Gm8918-201ENSMUST00000190587 1087 ntBASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Gm37105-201ENSMUST00000192251 2085 ntBASIC19.84■□□□□ 0.77
Ccdc180J3QNE4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc180J3QNE4 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc180J3QNE4 AC154197.1-201ENSMUST00000225136 1382 ntBASIC19.83■□□□□ 0.77
Ccdc180J3QNE4 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc180J3QNE4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc180J3QNE4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc180J3QNE4 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc180J3QNE4 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc180J3QNE4 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc180J3QNE4 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc180J3QNE4 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc180J3QNE4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ccdc180J3QNE4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc180J3QNE4 Mir744-201ENSMUST00000103261 100 ntBASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Gm28746-201ENSMUST00000187453 380 ntBASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Gm34248-201ENSMUST00000200027 474 ntBASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Gm29689-201ENSMUST00000221076 589 ntBASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 CU025215.1-201ENSMUST00000222986 603 ntBASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 AC103672.1-201ENSMUST00000227502 365 ntBASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC19.83■□□□□ 0.76
Ccdc180J3QNE4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Gm36940-201ENSMUST00000194281 2036 ntBASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Gm45663-201ENSMUST00000210429 1632 ntBASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Gm14633-201ENSMUST00000121152 470 ntBASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Gm4462-201ENSMUST00000166453 492 ntBASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 AC102523.1-201ENSMUST00000228706 1144 ntBASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Gm8618-201ENSMUST00000097570 432 ntBASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc180J3QNE4 Gm13426-201ENSMUST00000117887 795 ntBASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Gm17107-201ENSMUST00000170983 553 ntBASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Gm26943-201ENSMUST00000182295 957 ntBASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Mir6973a-201ENSMUST00000183646 78 ntBASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Gm37944-201ENSMUST00000194233 414 ntBASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Gm6426-201ENSMUST00000209048 854 ntBASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc180J3QNE4 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms