Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm13461-201ENSMUST00000120980 662 ntBASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm12407-201ENSMUST00000180219 324 ntBASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm9540-201ENSMUST00000188230 478 ntBASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm4482-201ENSMUST00000200876 742 ntBASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 CT030182.1-201ENSMUST00000225935 533 ntBASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 AC144938.1-201ENSMUST00000223994 2167 ntBASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm13615-201ENSMUST00000120242 1612 ntBASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Spata33-207ENSMUST00000212760 4074 ntBASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC9.92□□□□□ -0.82
Pcdh1F7BJK1 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm8111-201ENSMUST00000117659 987 ntBASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm14277-201ENSMUST00000121195 360 ntBASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm24844-201ENSMUST00000158679 127 ntBASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm42859-201ENSMUST00000199572 193 ntBASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm9257-201ENSMUST00000221254 232 ntBASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms