Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm9487-201ENSMUST00000216600 472 ntBASIC14.48□□□□□ -0.09
U2af1Q9D883 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
U2af1Q9D883 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC14.48□□□□□ -0.09
U2af1Q9D883 Gm8181-201ENSMUST00000062242 669 ntBASIC14.48□□□□□ -0.09
U2af1Q9D883 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
U2af1Q9D883 Gm25517-201ENSMUST00000083865 134 ntBASIC14.48□□□□□ -0.09
U2af1Q9D883 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
U2af1Q9D883 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
U2af1Q9D883 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
U2af1Q9D883 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
U2af1Q9D883 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
U2af1Q9D883 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
U2af1Q9D883 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
U2af1Q9D883 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
U2af1Q9D883 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
U2af1Q9D883 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
U2af1Q9D883 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
U2af1Q9D883 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
U2af1Q9D883 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
U2af1Q9D883 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
U2af1Q9D883 Gm43963-201ENSMUST00000203466 2488 ntBASIC14.48□□□□□ -0.09
U2af1Q9D883 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
U2af1Q9D883 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
U2af1Q9D883 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC14.47□□□□□ -0.09
U2af1Q9D883 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC14.47□□□□□ -0.09
U2af1Q9D883 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
U2af1Q9D883 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Gm5178-201ENSMUST00000219380 898 ntBASIC14.47□□□□□ -0.09
U2af1Q9D883 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Gm26670-202ENSMUST00000226862 340 ntBASIC14.47□□□□□ -0.09
U2af1Q9D883 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC14.47□□□□□ -0.09
U2af1Q9D883 Gm7589-201ENSMUST00000085631 534 ntBASIC14.47□□□□□ -0.09
U2af1Q9D883 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
U2af1Q9D883 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC14.47□□□□□ -0.09
U2af1Q9D883 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
U2af1Q9D883 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
U2af1Q9D883 Gfra2-203ENSMUST00000227697 1323 ntBASIC14.46□□□□□ -0.09
U2af1Q9D883 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
U2af1Q9D883 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
U2af1Q9D883 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
U2af1Q9D883 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
U2af1Q9D883 Gm6158-201ENSMUST00000109467 904 ntBASIC14.46□□□□□ -0.09
U2af1Q9D883 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
U2af1Q9D883 Mir1893-201ENSMUST00000122565 83 ntBASIC14.46□□□□□ -0.09
U2af1Q9D883 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC14.46□□□□□ -0.09
U2af1Q9D883 Gm23218-201ENSMUST00000158124 276 ntBASIC14.46□□□□□ -0.09
U2af1Q9D883 Mipep-ps-201ENSMUST00000177439 291 ntBASIC14.46□□□□□ -0.09
U2af1Q9D883 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
U2af1Q9D883 Gm6423-201ENSMUST00000204315 934 ntBASIC14.46□□□□□ -0.09
U2af1Q9D883 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
U2af1Q9D883 Gm18042-201ENSMUST00000219887 790 ntBASIC14.46□□□□□ -0.09
U2af1Q9D883 AC154572.1-201ENSMUST00000226098 1204 ntBASIC14.46□□□□□ -0.09
U2af1Q9D883 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
U2af1Q9D883 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
U2af1Q9D883 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
U2af1Q9D883 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
U2af1Q9D883 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
U2af1Q9D883 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
U2af1Q9D883 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC14.46□□□□□ -0.1
U2af1Q9D883 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
U2af1Q9D883 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
U2af1Q9D883 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
U2af1Q9D883 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms