Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gm14219-201ENSMUST00000120414 288 ntBASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gm22877-201ENSMUST00000175451 105 ntBASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gm6450-201ENSMUST00000200896 574 ntBASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gm45594-201ENSMUST00000211717 241 ntBASIC12.39□□□□□ -0.43
Smc1aQ9CU62 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smc1aQ9CU62 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Gm26047-201ENSMUST00000157308 113 ntBASIC12.38□□□□□ -0.43
Smc1aQ9CU62 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Gm8531-201ENSMUST00000188319 893 ntBASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Gm26047-202ENSMUST00000198840 115 ntBASIC12.38□□□□□ -0.43
Smc1aQ9CU62 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Gm23680-201ENSMUST00000083162 164 ntBASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smc1aQ9CU62 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smc1aQ9CU62 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smc1aQ9CU62 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smc1aQ9CU62 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smc1aQ9CU62 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smc1aQ9CU62 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smc1aQ9CU62 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.37□□□□□ -0.43
Smc1aQ9CU62 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smc1aQ9CU62 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms