Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 AC153961.1-201ENSMUST00000217760 385 ntBASIC13.64□□□□□ -0.23
RtcbQ99LF4 AC154585.1-201ENSMUST00000218917 997 ntBASIC13.64□□□□□ -0.23
RtcbQ99LF4 Gm5424-201ENSMUST00000053865 1240 ntBASIC13.64□□□□□ -0.23
RtcbQ99LF4 Gm8730-201ENSMUST00000076373 954 ntBASIC13.64□□□□□ -0.23
RtcbQ99LF4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.64□□□□□ -0.23
RtcbQ99LF4 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC13.63□□□□□ -0.23
RtcbQ99LF4 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.63□□□□□ -0.23
RtcbQ99LF4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Gm14592-201ENSMUST00000117201 560 ntBASIC13.63□□□□□ -0.23
RtcbQ99LF4 Gm12136-201ENSMUST00000120460 1209 ntBASIC13.63□□□□□ -0.23
RtcbQ99LF4 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Gm6686-201ENSMUST00000178455 258 ntBASIC13.63□□□□□ -0.23
RtcbQ99LF4 Gm37597-201ENSMUST00000191853 382 ntBASIC13.63□□□□□ -0.23
RtcbQ99LF4 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC13.63□□□□□ -0.23
RtcbQ99LF4 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC13.63□□□□□ -0.23
RtcbQ99LF4 Gm43097-201ENSMUST00000196867 151 ntBASIC13.63□□□□□ -0.23
RtcbQ99LF4 Gm43106-201ENSMUST00000199485 637 ntBASIC13.63□□□□□ -0.23
RtcbQ99LF4 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Gm18042-201ENSMUST00000219887 790 ntBASIC13.63□□□□□ -0.23
RtcbQ99LF4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RtcbQ99LF4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RtcbQ99LF4 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm5766-201ENSMUST00000160520 1977 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm6939-201ENSMUST00000122029 864 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RtcbQ99LF4 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm6216-201ENSMUST00000182390 687 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm5274-201ENSMUST00000182641 1003 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm4960-201ENSMUST00000182928 1001 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC13.62□□□□□ -0.23
RtcbQ99LF4 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm38007-201ENSMUST00000192187 313 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm42687-201ENSMUST00000199075 164 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm42859-201ENSMUST00000199572 193 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm42803-201ENSMUST00000201051 451 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm18164-201ENSMUST00000213769 927 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm18166-201ENSMUST00000215557 927 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm29689-201ENSMUST00000221076 589 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 AC154433.1-201ENSMUST00000224401 1183 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm10581-201ENSMUST00000097986 231 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms