Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Slc44a2Q8BY89 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc44a2Q8BY89 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc44a2Q8BY89 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.74□□□□□ -0.69
Slc44a2Q8BY89 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc44a2Q8BY89 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Slc44a2Q8BY89 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc44a2Q8BY89 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc44a2Q8BY89 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc44a2Q8BY89 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Slc44a2Q8BY89 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc44a2Q8BY89 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gm15207-201ENSMUST00000119259 442 ntBASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gm17040-202ENSMUST00000170597 889 ntBASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gm37301-201ENSMUST00000195412 568 ntBASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc44a2Q8BY89 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Gm12501-201ENSMUST00000119163 529 ntBASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Gm7150-201ENSMUST00000122032 981 ntBASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Gm20495-201ENSMUST00000173902 235 ntBASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Gm27530-201ENSMUST00000184096 98 ntBASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Gm5363-201ENSMUST00000211927 938 ntBASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc44a2Q8BY89 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms